Pseudomonas syringae pv. tomato DC3000, PSPTO_0544 (cca)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0544
NCBI Old Locus Tag	PSPTO0544
Name	cca Synonym: PSPTO0544
Replicon	chromosome
Genomic location	596465 - 597694 (- strand)

Cross-References

RefSeq	NP_790391.1
GI	28867772
Entrez	1182154
INSDC	AAO54086.1
NCBI Locus Tag	PSPTO_0544
NCBI Old Locus Tag	PSPTO0544
UniParc	UPI0000008495
UniProtKB Acc	Q88A53
UniProtKB ID	CCA_PSESM
UniRef100	UniRef100_Q88A53
UniRef50	UniRef50_Q4K4W8
UniRef90	UniRef90_Q88A53

Product

Feature Type	CDS
Coding Frame	1
Product Name	tRNA nucleotidyltransferase
Synonyms
Evidence for Translation
Charge (pH 7)	-2.05
Kyte-Doolittle Hydrophobicity Value	-0.334
Molecular Weight (kDa)	45.9
Isoelectric Point (pI)	6.80

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 574 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000567 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0544 Search term: cca Search term: tRNA nucleotidyltransferase

Human Homologs

References