Pseudomonas syringae pv. tomato DC3000, PSPTO_0554

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_0554
NCBI Old Locus TagPSPTO0554
Name
Synonym: PSPTO0554
Replicon chromosome
Genomic location 607757 - 610474 (- strand)

Cross-References

RefSeq NP_790401.1
GI 28867782
Entrez 1182164
INSDC AAO54096.1
NCBI Locus Tag PSPTO_0554
NCBI Old Locus Tag PSPTO0554
UniParc UPI0000F3BEC2
UniProtKB Acc Q88A43
UniProtKB ID LPTD_PSESM
UniRef100 UniRef100_Q88A43
UniRef50 UniRef50_Q88A43
UniRef90 UniRef90_Q88A43

Product

Feature Type CDS
Coding Frame 1
Product Name
organic solvent tolerance protein
Synonyms
Evidence for Translation
Charge (pH 7) -19.22
Kyte-Doolittle Hydrophobicity Value -0.643
Molecular Weight (kDa) 102.2
Isoelectric Point (pI) 4.89

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 255 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000578 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_0554

Human Homologs

References

No references are associated with this feature.