Pseudomonas syringae pv. tomato DC3000, PSPTO_0676

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0676
NCBI Old Locus Tag	PSPTO0676
Name	Synonym: PSPTO0676
Replicon	chromosome
Genomic location	731587 - 733890 (+ strand)

Cross-References

RefSeq	NP_790523.1
GI	28867904
Entrez	1182296
INSDC	AAO54218.1
NCBI Locus Tag	PSPTO_0676
NCBI Old Locus Tag	PSPTO0676
UniParc	UPI0000008517
UniProtKB Acc	Q889S3
UniProtKB ID	Q889S3_PSESM
UniRef100	UniRef100_Q889S3
UniRef50	UniRef50_G8PZ53
UniRef90	UniRef90_Q889S3

Product

Feature Type	CDS
Coding Frame	1
Product Name	mechanosensitive ion channel family protein
Synonyms
Evidence for Translation
Charge (pH 7)	17.45
Kyte-Doolittle Hydrophobicity Value	0.366
Molecular Weight (kDa)	82.3
Isoelectric Point (pI)	9.93

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 470 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004714 (518 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0676 Search term: mechanosensitive ion channel family protein

Human Homologs

References