Pseudomonas syringae pv. tomato DC3000, PSPTO_0722 (ppa-1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_0722
NCBI Old Locus TagPSPTO0722
Name
ppa-1
Synonym: PSPTO0722
Replicon chromosome
Genomic location 771799 - 772326 (- strand)

Cross-References

RefSeq NP_790569.1
GI 28867950
Entrez 1182342
INSDC AAO54264.1
NCBI Locus Tag PSPTO_0722
NCBI Old Locus Tag PSPTO0722
UniParc UPI0000008545
UniProtKB Acc Q889M7
UniProtKB ID IPYR1_PSESM
UniRef100 UniRef100_Q889M7
UniRef50 UniRef50_Q889M7
UniRef90 UniRef90_Q889M7

Product

Feature Type CDS
Coding Frame 1
Product Name
inorganic pyrophosphatase
Synonyms
Evidence for Translation
Charge (pH 7) -8.08
Kyte-Doolittle Hydrophobicity Value -0.174
Molecular Weight (kDa) 19.4
Isoelectric Point (pI) 4.62

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4XEL HYDROLASE 12/24/14 Crystal structure of Inorganic pyrophosphatase (PPase) from Pseudomonas aeruginosa Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) 2 X-RAY DIFFRACTION 93.1

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 483 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001653 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_0722
Search term: ppa-1

Human Homologs

References

No references are associated with this feature.