Pseudomonas syringae pv. tomato DC3000, PSPTO_0729 (mpl)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_0729
NCBI Old Locus TagPSPTO0729
Name
mpl
Synonym: PSPTO0729
Replicon chromosome
Genomic location 778928 - 780277 (+ strand)

Cross-References

RefSeq NP_790576.1
GI 28867957
Entrez 1182349
INSDC AAO54271.1
NCBI Locus Tag PSPTO_0729
NCBI Old Locus Tag PSPTO0729
UniParc UPI000000854C
UniProtKB Acc Q889M0
UniProtKB ID Q889M0_PSESM
UniRef100 UniRef100_Q889M0
UniRef50 UniRef50_P37773
UniRef90 UniRef90_D7I5Y7

Product

Feature Type CDS
Coding Frame 1
Product Name
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
Synonyms
Evidence for Translation
Charge (pH 7) -6.52
Kyte-Doolittle Hydrophobicity Value 0.065
Molecular Weight (kDa) 48.3
Isoelectric Point (pI) 6.38

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 579 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001663 (497 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_0729
Search term: mpl

Human Homologs

References

No references are associated with this feature.