Pseudomonas syringae pv. tomato DC3000, PSPTO_0917 (ndH)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0917
NCBI Old Locus Tag	PSPTO0917
Name	ndH Synonym: PSPTO0917
Replicon	chromosome
Genomic location	998903 - 1000201 (- strand)

Cross-References

RefSeq	NP_790756.1
GI	28868137
Entrez	1182546
INSDC	AAO54451.1
NCBI Locus Tag	PSPTO_0917
NCBI Old Locus Tag	PSPTO0917
UniParc	UPI00000085F7
UniProtKB Acc	Q888U9
UniProtKB ID	Q888U9_PSESM
UniRef100	UniRef100_Q888U9
UniRef50	UniRef50_C5ATR0
UniRef90	UniRef90_Q48ND0

Product

Feature Type	CDS
Coding Frame	1
Product Name	NADH dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7)	4.76
Kyte-Doolittle Hydrophobicity Value	-0.002
Molecular Weight (kDa)	46.5
Isoelectric Point (pI)	8.15

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 484 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004118 (534 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0917 Search term: ndH Search term: NADH dehydrogenase

Human Homologs

References