Pseudomonas syringae pv. tomato DC3000, PSPTO_0998

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0998
NCBI Old Locus Tag	PSPTO0998
Name	Synonym: PSPTO0998
Replicon	chromosome
Genomic location	1089883 - 1090257 (+ strand)

Cross-References

RefSeq	NP_790837.1
GI	28868218
Entrez	1182632
INSDC	AAO54532.1
NCBI Locus Tag	PSPTO_0998
NCBI Old Locus Tag	PSPTO0998
UniParc	UPI0000008648
UniProtKB Acc	Q888L9
UniProtKB ID	Q888L9_PSESM
UniRef100	UniRef100_Q888L9
UniRef50	UniRef50_S6D3C7
UniRef90	UniRef90_Q48N49

Product

Feature Type	CDS
Coding Frame	1
Product Name	alkylphosphonate utilization operon protein PhnA
Synonyms
Evidence for Translation
Charge (pH 7)	-3.68
Kyte-Doolittle Hydrophobicity Value	-0.092
Molecular Weight (kDa)	13.4
Isoelectric Point (pI)	4.91

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 265 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000126 (538 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0998 Search term: alkylphosphonate utilization operon protein PhnA

Human Homologs

References