Pseudomonas syringae pv. tomato DC3000, PSPTO_1051 (dctP)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1051
NCBI Old Locus Tag	PSPTO1051
Name	dctP Synonym: PSPTO1051
Replicon	chromosome
Genomic location	1148160 - 1149185 (- strand)

Cross-References

RefSeq	NP_790887.1
GI	28868268
Entrez	1182685
INSDC	AAO54582.1
NCBI Locus Tag	PSPTO_1051
NCBI Old Locus Tag	PSPTO1051
UniParc	UPI0000008676
UniProtKB Acc	Q888H3
UniProtKB ID	Q888H3_PSESM
UniRef100	UniRef100_Q888H3
UniRef50	UniRef50_Q888H3
UniRef90	UniRef90_Q888H3

Product

Feature Type	CDS
Coding Frame	1
Product Name	TRAP dicarboxylate transporter subunit DctP
Synonyms
Evidence for Translation
Charge (pH 7)	0.18
Kyte-Doolittle Hydrophobicity Value	-0.172
Molecular Weight (kDa)	37.5
Isoelectric Point (pI)	7.08

Subcellular localization

Individual Mappings	Localization Confidence PMID Periplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 295 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG015290 (137 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1051 Search term: dctP Search term: TRAP dicarboxylate transporter subunit DctP

Human Homologs

References