Pseudomonas syringae pv. tomato DC3000, PSPTO_1106 (lolB)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1106
NCBI Old Locus Tag	PSPTO1106
Name	lolB Synonym: PSPTO1106
Replicon	chromosome
Genomic location	1220460 - 1221077 (- strand)

Cross-References

RefSeq	NP_790940.1
GI	28868321
Entrez	1182742
INSDC	AAO54635.1
NCBI Locus Tag	PSPTO_1106
NCBI Old Locus Tag	PSPTO1106
UniParc	UPI00000086A7
UniProtKB Acc	Q888C4
UniProtKB ID	LOLB_PSESM
UniRef100	UniRef100_Q888C4
UniRef50	UniRef50_Q4K692
UniRef90	UniRef90_Q888C4

Product

Feature Type	CDS
Coding Frame	1
Product Name	outer membrane lipoprotein LolB
Synonyms
Evidence for Translation
Charge (pH 7)	1.92
Kyte-Doolittle Hydrophobicity Value	-0.400
Molecular Weight (kDa)	22.9
Isoelectric Point (pI)	8.44

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 118 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004318 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1106 Search term: lolB Search term: outer membrane lipoprotein LolB

Human Homologs

References