Pseudomonas syringae pv. tomato DC3000, PSPTO_1110 (hemK)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1110
NCBI Old Locus Tag	PSPTO1110
Name	hemK Synonym: PSPTO1110
Replicon	chromosome
Genomic location	1225393 - 1226226 (+ strand)

Cross-References

RefSeq	NP_790944.1
GI	28868325
Entrez	1182746
INSDC	AAO54639.1
NCBI Locus Tag	PSPTO_1110
NCBI Old Locus Tag	PSPTO1110
UniParc	UPI00000086AB
UniProtKB Acc	Q888C0
UniProtKB ID	Q888C0_PSESM
UniRef100	UniRef100_Q888C0
UniRef50	UniRef50_Q8PC99
UniRef90	UniRef90_Q888C0

Product

Feature Type	CDS
Coding Frame	1
Product Name	hemK protein
Synonyms
Evidence for Translation
Charge (pH 7)	-9.13
Kyte-Doolittle Hydrophobicity Value	-0.104
Molecular Weight (kDa)	30.5
Isoelectric Point (pI)	5.03

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 613 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004314 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1110 Search term: hemK Search term: hemK protein

Human Homologs

References