Pseudomonas syringae pv. tomato DC3000, PSPTO_1149

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1149
NCBI Old Locus Tag	PSPTO1149
Name	Synonym: PSPTO1149
Replicon	chromosome
Genomic location	1259909 - 1261846 (+ strand)

Cross-References

RefSeq	NP_790983.1
GI	28868364
Entrez	1182785
INSDC	AAO54678.1
NCBI Locus Tag	PSPTO_1149
NCBI Old Locus Tag	PSPTO1149
UniParc	UPI00000086D2
UniProtKB Acc	Q887Y1
UniProtKB ID	Q887Y1_PSESM
UniRef100	UniRef100_Q887Y1
UniRef50	UniRef50_A0A031J2R5
UniRef90	UniRef90_Q887Y1

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-9.66
Kyte-Doolittle Hydrophobicity Value	-0.327
Molecular Weight (kDa)	69.8
Isoelectric Point (pI)	5.06

Subcellular localization

Individual Mappings	Localization Confidence PMID Outer Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 45 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001751 (907 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1149

Human Homologs

References