Pseudomonas syringae pv. tomato DC3000, PSPTO_1196

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1196
NCBI Old Locus Tag	PSPTO1196
Name	Synonym: PSPTO1196
Replicon	chromosome
Genomic location	1312251 - 1313501 (- strand)

Cross-References

RefSeq	NP_791028.1
GI	28868409
Entrez	1182832
INSDC	AAO54723.1
NCBI Locus Tag	PSPTO_1196
NCBI Old Locus Tag	PSPTO1196
UniParc	UPI00000086FB
UniProtKB Acc	Q887U0
UniProtKB ID	Q887U0_PSESM
UniRef100	UniRef100_Q887U0
UniRef50	UniRef50_P27828
UniRef90	UniRef90_Q48ML9

Product

Feature Type	CDS
Coding Frame	1
Product Name	UDP-N-acetylglucosamine 2-epimerase
Synonyms
Evidence for Translation
Charge (pH 7)	-0.47
Kyte-Doolittle Hydrophobicity Value	-0.220
Molecular Weight (kDa)	46.2
Isoelectric Point (pI)	6.93

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 431 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002455 (227 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1196 Search term: UDP-N-acetylglucosamine 2-epimerase

Human Homologs

References