Pseudomonas syringae pv. tomato DC3000, PSPTO_1211

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1211
NCBI Old Locus Tag	PSPTO1211
Name	Synonym: PSPTO1211
Replicon	chromosome
Genomic location	1326348 - 1327913 (+ strand)

Cross-References

RefSeq	NP_791043.1
GI	28868424
Entrez	1182847
INSDC	AAO54738.1
NCBI Locus Tag	PSPTO_1211
NCBI Old Locus Tag	PSPTO1211
UniParc	UPI000000870A
UniProtKB Acc	Q887S5
UniProtKB ID	Q887S5_PSESM
UniRef100	UniRef100_Q887S5
UniRef50	UniRef50_E2XM38
UniRef90	UniRef90_Q887S5

Product

Feature Type	CDS
Coding Frame	1
Product Name	membrane protein
Synonyms
Evidence for Translation
Charge (pH 7)	13.13
Kyte-Doolittle Hydrophobicity Value	0.242
Molecular Weight (kDa)	57.7
Isoelectric Point (pI)	10.21

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 101 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000774 (846 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1211 Search term: membrane protein

Human Homologs

References