Pseudomonas syringae pv. tomato DC3000, PSPTO_1487

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1487
NCBI Old Locus Tag	PSPTO1487
Name	Synonym: PSPTO1487
Replicon	chromosome
Genomic location	1635337 - 1635879 (+ strand)

Cross-References

RefSeq	NP_791313.1
GI	28868694
Entrez	1183124
INSDC	AAO55008.1
NCBI Locus Tag	PSPTO_1487
NCBI Old Locus Tag	PSPTO1487
UniParc	UPI0000008811
UniProtKB Acc	Q886T9
UniProtKB ID	Q886T9_PSESM
UniRef100	UniRef100_A0A038GJJ1
UniRef50	UniRef50_C1DSZ1
UniRef90	UniRef90_I7BB50

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-5.31
Kyte-Doolittle Hydrophobicity Value	-0.405
Molecular Weight (kDa)	20.7
Isoelectric Point (pI)	4.93

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
2OT9	STRUCTURAL GENOMICS, UNKNOWN FUNCTION	02/07/07	Crystal structure of YaeQ protein from Pseudomonas syringae	Pseudomonas syringae pv. tomato	1.97	X-RAY DIFFRACTION	100.0

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 118 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001957 (537 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1487

Human Homologs

References