Pseudomonas syringae pv. tomato DC3000, PSPTO_1502

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_1502
NCBI Old Locus TagPSPTO1502
Name
Synonym: PSPTO1502
Replicon chromosome
Genomic location 1659777 - 1660502 (+ strand)

Cross-References

RefSeq NP_791327.1
GI 28868708
Entrez 1183139
INSDC AAO55022.1
NCBI Locus Tag PSPTO_1502
NCBI Old Locus Tag PSPTO1502
UniParc UPI000000881F
UniProtKB Acc Q886S5
UniProtKB ID Q886S5_PSESM
UniRef100 UniRef100_Q886S5
UniRef50 UniRef50_Q886S5
UniRef90 UniRef90_Q886S5

Product

Feature Type CDS
Coding Frame 1
Product Name
TetR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 6.41
Kyte-Doolittle Hydrophobicity Value -0.217
Molecular Weight (kDa) 27.2
Isoelectric Point (pI) 9.74

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 72 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001978 (500 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_1502

Human Homologs

References

No references are associated with this feature.