Pseudomonas syringae pv. tomato DC3000, PSPTO_1535 (tsf)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1535
NCBI Old Locus Tag	PSPTO1535
Name	tsf Synonym: PSPTO1535
Replicon	chromosome
Genomic location	1694491 - 1695354 (+ strand)

Cross-References

RefSeq	NP_791360.1
GI	28868741
Entrez	1183172
INSDC	AAO55055.1
NCBI Locus Tag	PSPTO_1535
NCBI Old Locus Tag	PSPTO1535
UniParc	UPI0000008840
UniProtKB Acc	Q886P2
UniProtKB ID	EFTS_PSESM
UniRef100	UniRef100_Q886P2
UniRef50	UniRef50_A1U3Q3
UniRef90	UniRef90_Q886P2

Product

Feature Type	CDS
Coding Frame	1
Product Name	translation elongation factor Ts
Synonyms
Evidence for Translation
Charge (pH 7)	-4.53
Kyte-Doolittle Hydrophobicity Value	-0.033
Molecular Weight (kDa)	30.6
Isoelectric Point (pI)	5.17

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 591 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002019 (537 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1535 Search term: tsf Search term: translation elongation factor Ts

Human Homologs

References