Pseudomonas syringae pv. tomato DC3000, PSPTO_1608

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1608
NCBI Old Locus Tag	PSPTO1608
Name	Synonym: PSPTO1608
Replicon	chromosome
Genomic location	1762728 - 1763891 (+ strand)

Cross-References

RefSeq	NP_791433.1
GI	28868814
Entrez	1183245
INSDC	AAO55128.1
NCBI Locus Tag	PSPTO_1608
NCBI Old Locus Tag	PSPTO1608
UniParc	UPI0000008888
UniProtKB Acc	Q886H1
UniProtKB ID	Q886H1_PSESM
UniRef100	UniRef100_Q886H1
UniRef50	UniRef50_W8XQ52
UniRef90	UniRef90_D7HX80

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-1.86
Kyte-Doolittle Hydrophobicity Value	-0.381
Molecular Weight (kDa)	42.8
Isoelectric Point (pI)	6.61

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 324 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001072 (523 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1608

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000330601 HHIP like 1 [Source:HGNC Symbol;Acc:HGNC:19710] E-value: 1.8e-17 Percent Identity: 28.4
Ensembl 110, assembly GRCh38.p14	ENSP00000349757 HHIP like 1 [Source:HGNC Symbol;Acc:HGNC:19710] E-value: 1.8e-17 Percent Identity: 28.4

References