Pseudomonas syringae pv. tomato DC3000, PSPTO_1675

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1675
NCBI Old Locus Tag	PSPTO1675
Name	Synonym: PSPTO1675
Replicon	chromosome
Genomic location	1846677 - 1847321 (- strand)

Cross-References

RefSeq	NP_791500.1
GI	28868881
Entrez	1183312
INSDC	AAO55195.1
NCBI Locus Tag	PSPTO_1675
NCBI Old Locus Tag	PSPTO1675
UniParc	UPI00000088C9
UniProtKB Acc	Q886A6
UniProtKB ID	Q886A6_PSESM
UniRef100	UniRef100_Q886A6
UniRef50	UniRef50_Q9I4H2
UniRef90	UniRef90_Q886A6

Product

Feature Type	CDS
Coding Frame	1
Product Name	siderophore biosynthesis protein
Synonyms
Evidence for Translation
Charge (pH 7)	-3.41
Kyte-Doolittle Hydrophobicity Value	-0.125
Molecular Weight (kDa)	23.5
Isoelectric Point (pI)	6.15

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 87 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001123 (532 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1675 Search term: siderophore biosynthesis protein

Human Homologs

References