Pseudomonas syringae pv. tomato DC3000, PSPTO_1679

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1679
NCBI Old Locus Tag	PSPTO1679
Name	Synonym: PSPTO1679
Replicon	chromosome
Genomic location	1849724 - 1850401 (+ strand)

Cross-References

RefSeq	NP_791504.1
GI	28868885
Entrez	1183316
INSDC	AAO55199.1
NCBI Locus Tag	PSPTO_1679
NCBI Old Locus Tag	PSPTO1679
UniParc	UPI00000088CD
UniProtKB Acc	Q886A2
UniProtKB ID	Q886A2_PSESM
UniRef100	UniRef100_A0A038G653
UniRef50	UniRef50_Q0C2L9
UniRef90	UniRef90_Q4ZQ31

Product

Feature Type	CDS
Coding Frame	1
Product Name	transcriptional regulatory protein PhoP
Synonyms
Evidence for Translation
Charge (pH 7)	-4.35
Kyte-Doolittle Hydrophobicity Value	-0.088
Molecular Weight (kDa)	25.4
Isoelectric Point (pI)	5.91

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 623 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001137 (524 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1679 Search term: transcriptional regulatory protein PhoP

Human Homologs

References