Pseudomonas syringae pv. tomato DC3000, PSPTO_1684

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1684
NCBI Old Locus Tag	PSPTO1684
Name	Synonym: PSPTO1684
Replicon	chromosome
Genomic location	1854218 - 1855042 (+ strand)

Cross-References

RefSeq	NP_791509.1
GI	28868890
Entrez	1183321
INSDC	AAO55204.1
NCBI Locus Tag	PSPTO_1684
NCBI Old Locus Tag	PSPTO1684
UniParc	UPI00000088D2
UniProtKB Acc	Q885Z7
UniProtKB ID	TTCA_PSESM
UniRef100	UniRef100_Q885Z7
UniRef50	UniRef50_Q885Z7
UniRef90	UniRef90_Q885Z7

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	3.50
Kyte-Doolittle Hydrophobicity Value	-0.253
Molecular Weight (kDa)	31.2
Isoelectric Point (pI)	8.13

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown (This protein may have multiple localization sites) Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 402 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001150 (540 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1684

Human Homologs

References