Pseudomonas syringae pv. tomato DC3000, PSPTO_1786

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1786
NCBI Old Locus Tag	PSPTO1786
Name	Synonym: PSPTO1786
Replicon	chromosome
Genomic location	1956613 - 1957335 (- strand)

Cross-References

RefSeq	NP_791611.1
GI	28868992
Entrez	1183427
INSDC	AAO55306.1
NCBI Locus Tag	PSPTO_1786
NCBI Old Locus Tag	PSPTO1786
UniParc	UPI0000008938
UniProtKB Acc	Q885P5
UniProtKB ID	Q885P5_PSESM
UniRef100	UniRef100_Q885P5
UniRef50	UniRef50_S0AN44
UniRef90	UniRef90_W0MTF9

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-8.59
Kyte-Doolittle Hydrophobicity Value	-0.401
Molecular Weight (kDa)	26.4
Isoelectric Point (pI)	5.31

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 399 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001167 (530 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1786

Human Homologs

References