Pseudomonas syringae pv. tomato DC3000, PSPTO_5637

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_5637
Name
Replicon chromosome
Genomic location 2006821 - 2007108 (+ strand)

Cross-References

RefSeq YP_003778204.1
GI 300781809
Entrez 9443575
INSDC ADD52992.1
NCBI Locus Tag PSPTO_5637
UniParc UPI00018737EF
UniProtKB Acc D3NQ17
UniProtKB ID D3NQ17_PSESM
UniRef100 UniRef100_D3NQ17
UniRef50 UniRef50_A4VK33
UniRef90 UniRef90_A0A085VR05

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -15.35
Kyte-Doolittle Hydrophobicity Value -0.281
Molecular Weight (kDa) 10.5
Isoelectric Point (pI) 3.77

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 2 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000867 (523 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_5637

Human Homologs

References

No references are associated with this feature.