Pseudomonas syringae pv. tomato DC3000, PSPTO_1895

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1895
NCBI Old Locus Tag	PSPTO1895
Name	Synonym: PSPTO1895
Replicon	chromosome
Genomic location	2071848 - 2072111 (+ strand)

Cross-References

RefSeq	NP_791718.1
GI	28869099
Entrez	1183540
INSDC	AAO55413.1
NCBI Locus Tag	PSPTO_1895
NCBI Old Locus Tag	PSPTO1895
UniParc	UPI00000089A3
UniProtKB Acc	Q885E0
UniProtKB ID	Q885E0_PSESM
UniRef100	UniRef100_Q885E0
UniRef50	UniRef50_Q885E0
UniRef90	UniRef90_Q885E0

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	3.16
Kyte-Doolittle Hydrophobicity Value	-0.494
Molecular Weight (kDa)	9.9
Isoelectric Point (pI)	9.12

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 49 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG017704 (95 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1895

Human Homologs

References