Pseudomonas syringae pv. tomato DC3000, PSPTO_1910

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1910
NCBI Old Locus Tag	PSPTO1910
Name	Synonym: PSPTO1910
Replicon	chromosome
Genomic location	2089979 - 2090728 (+ strand)

Cross-References

RefSeq	NP_791733.1
GI	28869114
Entrez	1183555
INSDC	AAO55428.1
NCBI Locus Tag	PSPTO_1910
NCBI Old Locus Tag	PSPTO1910
UniParc	UPI00000089B2
UniProtKB Acc	Q885C5
UniProtKB ID	Q885C5_PSESM
UniRef100	UniRef100_Q885C5
UniRef50	UniRef50_L8MBZ8
UniRef90	UniRef90_Q885C5

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	7.47
Kyte-Doolittle Hydrophobicity Value	-0.077
Molecular Weight (kDa)	26.9
Isoelectric Point (pI)	10.50

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 69 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001547 (424 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1910

Human Homologs

References