Pseudomonas syringae pv. tomato DC3000, PSPTO_1934 (flgC)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1934
NCBI Old Locus Tag	PSPTO1934
Name	flgC Synonym: PSPTO1934
Replicon	chromosome
Genomic location	2114381 - 2114821 (+ strand)

Cross-References

RefSeq	NP_791757.1
GI	28869138
Entrez	1183579
INSDC	AAO55452.1
NCBI Locus Tag	PSPTO_1934
NCBI Old Locus Tag	PSPTO1934
UniParc	UPI00000089C9
UniProtKB Acc	Q885A2
UniProtKB ID	Q885A2_PSESM
UniRef100	UniRef100_A0A038GBC1
UniRef50	UniRef50_Q4K866
UniRef90	UniRef90_A0A038GBC1

Product

Feature Type	CDS
Coding Frame	1
Product Name	flagellar basal body rod protein FlgC
Synonyms
Evidence for Translation
Charge (pH 7)	-5.53
Kyte-Doolittle Hydrophobicity Value	-0.397
Molecular Weight (kDa)	15.7
Isoelectric Point (pI)	4.43

Subcellular localization

Individual Mappings	Localization Confidence PMID Flagellar Note: This is based on PSORTb V3.0 secondary localization prediction Class 3 20472543 Periplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 317 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001040 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1934 Search term: flgC Search term: flagellar basal body rod protein FlgC

Human Homologs

References