Pseudomonas syringae pv. tomato DC3000, PSPTO_2016 (acnA)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_2016
NCBI Old Locus Tag	PSPTO2016
Name	acnA Synonym: PSPTO2016
Replicon	chromosome
Genomic location	2202961 - 2205705 (- strand)

Cross-References

RefSeq	NP_791839.1
GI	28869220
Entrez	1183661
INSDC	AAO55534.1
NCBI Locus Tag	PSPTO_2016
NCBI Old Locus Tag	PSPTO2016
UniParc	UPI0000008A19
UniProtKB Acc	Q884S2
UniProtKB ID	Q884S2_PSESM
UniRef100	UniRef100_Q884S2
UniRef50	UniRef50_P25516
UniRef90	UniRef90_Q884S2

Product

Feature Type	CDS
Coding Frame	1
Product Name	aconitate hydratase 1
Synonyms
Evidence for Translation
Charge (pH 7)	-27.03
Kyte-Doolittle Hydrophobicity Value	-0.170
Molecular Weight (kDa)	99.2
Isoelectric Point (pI)	4.77

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 616 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000767 (1061 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_2016 Search term: acnA Search term: aconitate hydratase 1

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000309477 aconitase 1 [Source:HGNC Symbol;Acc:HGNC:117] E-value: 1.1e-265 Percent Identity: 53.2
Ensembl 110, assembly GRCh38.p14	ENSP00000438733 aconitase 1 [Source:HGNC Symbol;Acc:HGNC:117] E-value: 1.1e-265 Percent Identity: 53.2
Ensembl 110, assembly GRCh38.p14	ENSP00000369255 aconitase 1 [Source:HGNC Symbol;Acc:HGNC:117] E-value: 1.1e-265 Percent Identity: 53.2

References