Pseudomonas syringae pv. tomato DC3000, PSPTO_2041

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_2041
NCBI Old Locus Tag	PSPTO2041
Name	Synonym: PSPTO2041
Replicon	chromosome
Genomic location	2224103 - 2224906 (- strand)

Cross-References

RefSeq	NP_791864.1
GI	28869245
Entrez	1183686
INSDC	AAO55559.1
NCBI Locus Tag	PSPTO_2041
NCBI Old Locus Tag	PSPTO2041
UniParc	UPI0000008A32
UniProtKB Acc	Q884P7
UniProtKB ID	Q884P7_PSESM
UniRef100	UniRef100_Q884P7
UniRef50	UniRef50_Q9I346
UniRef90	UniRef90_Q884P7

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	2.38
Kyte-Doolittle Hydrophobicity Value	-0.573
Molecular Weight (kDa)	30.7
Isoelectric Point (pI)	7.89

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 2 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003711 (534 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_2041

Human Homologs

References