Pseudomonas syringae pv. tomato DC3000, PSPTO_2140

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_2140
NCBI Old Locus Tag	PSPTO2140
Name	Synonym: PSPTO2140
Replicon	chromosome
Genomic location	2324704 - 2325456 (- strand)

Cross-References

RefSeq	NP_791962.1
GI	28869343
Entrez	1183787
INSDC	AAO55657.1
NCBI Locus Tag	PSPTO_2140
NCBI Old Locus Tag	PSPTO2140
UniParc	UPI0000008A93
UniProtKB Acc	Q884F3
UniProtKB ID	Q884F3_PSESM
UniRef100	UniRef100_Q884F3
UniRef50	UniRef50_D7HYC2
UniRef90	UniRef90_D7HYC2

Product

Feature Type	CDS
Coding Frame	1
Product Name	cation ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	4.41
Kyte-Doolittle Hydrophobicity Value	-0.075
Molecular Weight (kDa)	27.2
Isoelectric Point (pI)	9.71

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003124 (478 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_2140 Search term: cation ABC transporter ATP-binding protein

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000384881 ATP binding cassette subfamily B member 5 [Source:HGNC Symbol;Acc:HGNC:46] E-value: 9.0e-10 Percent Identity: 31.0
Ensembl 110, assembly GRCh38.p14	ENSP00000258738 ATP binding cassette subfamily B member 5 [Source:HGNC Symbol;Acc:HGNC:46] E-value: 9.0e-10 Percent Identity: 31.0

References