Pseudomonas syringae pv. tomato DC3000, PSPTO_2161

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_2161
NCBI Old Locus TagPSPTO2161
Name
Synonym: PSPTO2161
Replicon chromosome
Genomic location 2374310 - 2376631 (+ strand)

Cross-References

RefSeq NP_791983.1
GI 28869364
Entrez 1183808
INSDC AAO55678.1
NCBI Locus Tag PSPTO_2161
NCBI Old Locus Tag PSPTO2161
UniParc UPI0000008AA8
UniProtKB Acc Q884D2
UniProtKB ID PVDQ_PSESM
UniRef100 UniRef100_Q884D2
UniRef50 UniRef50_Q9I194
UniRef90 UniRef90_Q884D2

Product

Feature Type CDS
Coding Frame 1
Product Name
penicillin amidase family protein
Synonyms
Evidence for Translation
Charge (pH 7) 1.93
Kyte-Doolittle Hydrophobicity Value -0.214
Molecular Weight (kDa) 84.4
Isoelectric Point (pI) 7.29

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 157 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003142 (466 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_2161

Human Homologs

References

No references are associated with this feature.