Pseudomonas syringae pv. tomato DC3000, PSPTO_2181

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_2181
NCBI Old Locus TagPSPTO2181
Name
Synonym: PSPTO2181
Replicon chromosome
Genomic location 2401837 - 2402646 (+ strand)

Cross-References

RefSeq NP_792003.1
GI 28869384
Entrez 1183832
INSDC AAO55698.1
NCBI Locus Tag PSPTO_2181
NCBI Old Locus Tag PSPTO2181
UniParc UPI0000008ABB
UniProtKB Acc Q884B4
UniProtKB ID Q884B4_PSESM
UniRef100 UniRef100_Q884B4
UniRef50 UniRef50_C1DMD7
UniRef90 UniRef90_Q884B4

Product

Feature Type CDS
Coding Frame 1
Product Name
IclR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 0.38
Kyte-Doolittle Hydrophobicity Value -0.251
Molecular Weight (kDa) 29.6
Isoelectric Point (pI) 7.15

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 317 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG017784 (129 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_2181

Human Homologs

References

No references are associated with this feature.