Pseudomonas syringae pv. tomato DC3000, PSPTO_2288 (prpC)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_2288
NCBI Old Locus Tag	PSPTO2288
Name	prpC Synonym: PSPTO2288
Replicon	chromosome
Genomic location	2529613 - 2530740 (+ strand)

Cross-References

RefSeq	NP_792107.1
GI	28869488
Entrez	1183939
INSDC	AAO55802.1
NCBI Locus Tag	PSPTO_2288
NCBI Old Locus Tag	PSPTO2288
UniParc	UPI0000008B21
UniProtKB Acc	Q883R2
UniProtKB ID	Q883R2_PSESM
UniRef100	UniRef100_Q883R2
UniRef50	UniRef50_Q56063
UniRef90	UniRef90_Q48JZ9

Product

Feature Type	CDS
Coding Frame	1
Product Name	2-methylcitrate synthase
Synonyms
Evidence for Translation
Charge (pH 7)	-6.50
Kyte-Doolittle Hydrophobicity Value	-0.152
Molecular Weight (kDa)	41.5
Isoelectric Point (pI)	5.97

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 550 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000768 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_2288 Search term: prpC Search term: 2-methylcitrate synthase

Human Homologs

References