Pseudomonas syringae pv. tomato DC3000, PSPTO_2379 (infC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_2379
NCBI Old Locus TagPSPTO2379
Name
infC
Synonym: PSPTO2379
Replicon chromosome
Genomic location 2629307 - 2629840 (+ strand)

Cross-References

RefSeq NP_792195.1
GI 28869576
Entrez 1184030
INSDC AAO55890.1
NCBI Locus Tag PSPTO_2379
NCBI Old Locus Tag PSPTO2379
UniParc UPI000012D344
UniProtKB Acc P0A132
UniProtKB ID IF3_PSESM
UniRef100 UniRef100_P0A132
UniRef50 UniRef50_Q4KEW3
UniRef90 UniRef90_Q4KEW3

Product

Feature Type CDS
Coding Frame 1
Product Name
translation initiation factor IF-3
Synonyms
Evidence for Translation
Charge (pH 7) 7.45
Kyte-Doolittle Hydrophobicity Value -0.569
Molecular Weight (kDa) 20.0
Isoelectric Point (pI) 10.12

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6VRJ TRANSLATION 02/07/20 Solution structure of Pseudomonas aeruginosa IF3 C-terminal domain Pseudomonas aeruginosa NOT SOLUTION NMR 91.7

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 582 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002828 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_2379
Search term: infC

Human Homologs

References

No references are associated with this feature.