Pseudomonas syringae pv. tomato DC3000, PSPTO_2380 (rpmI)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_2380
NCBI Old Locus Tag	PSPTO2380
Name	rpmI Synonym: PSPTO2380
Replicon	chromosome
Genomic location	2629901 - 2630095 (+ strand)

Cross-References

RefSeq	NP_792196.1
GI	28869577
Entrez	1184031
INSDC	AAO55891.1
NCBI Locus Tag	PSPTO_2380
NCBI Old Locus Tag	PSPTO2380
UniParc	UPI0000000880
UniProtKB Acc	P0A163
UniProtKB ID	RL35_PSESM
UniRef100	UniRef100_Q48JS1
UniRef50	UniRef50_Q65TP8
UniRef90	UniRef90_C1DF44

Product

Feature Type	CDS
Coding Frame	1
Product Name	50S ribosomal protein L35
Synonyms
Evidence for Translation
Charge (pH 7)	17.94
Kyte-Doolittle Hydrophobicity Value	-0.795
Molecular Weight (kDa)	7.4
Isoelectric Point (pI)	12.67

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 430 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002829 (526 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_2380 Search term: rpmI Search term: 50S ribosomal protein L35

Human Homologs

References