Pseudomonas syringae pv. tomato DC3000, PSPTO_2392

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_2392
NCBI Old Locus Tag	PSPTO2392
Name	Synonym: PSPTO2392
Replicon	chromosome
Genomic location	2640996 - 2641355 (+ strand)

Cross-References

RefSeq	NP_792208.1
GI	28869589
Entrez	1184044
INSDC	AAO55903.1
NCBI Locus Tag	PSPTO_2392
NCBI Old Locus Tag	PSPTO2392
UniParc	UPI0000008B7F
UniProtKB Acc	Q883H0
UniProtKB ID	Q883H0_PSESM
UniRef100	UniRef100_Q883H0
UniRef50	UniRef50_Q883H0
UniRef90	UniRef90_Q883H0

Product

Feature Type	CDS
Coding Frame	1
Product Name	ISPsy5, Orf1
Synonyms
Evidence for Translation
Charge (pH 7)	1.44
Kyte-Doolittle Hydrophobicity Value	-0.192
Molecular Weight (kDa)	14.2
Isoelectric Point (pI)	8.47

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 135 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG017833 (2 members)
Putative Inparalogs	1 predicted inparalogs ISPsy5, Orf1 (PSPTO_3966) 97.5% identity

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_2392 Search term: ISPsy5, Orf1

Human Homologs

References