Pseudomonas syringae pv. tomato DC3000, PSPTO_2496

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_2496
NCBI Old Locus Tag	PSPTO2496
Name	Synonym: PSPTO2496
Replicon	chromosome
Genomic location	2760925 - 2762343 (- strand)

Cross-References

RefSeq	NP_792308.1
GI	28869689
Entrez	1184148
INSDC	AAO56003.1
NCBI Locus Tag	PSPTO_2496
NCBI Old Locus Tag	PSPTO2496
UniParc	UPI0000008BDD
UniProtKB Acc	Q882X6
UniProtKB ID	Q882X6_PSESM
UniRef100	UniRef100_Q882X6
UniRef50	UniRef50_Q5GYI7
UniRef90	UniRef90_Q6J2E8

Product

Feature Type	CDS
Coding Frame	1
Product Name	major facilitator family transporter
Synonyms
Evidence for Translation
Charge (pH 7)	9.31
Kyte-Doolittle Hydrophobicity Value	0.572
Molecular Weight (kDa)	52.1
Isoelectric Point (pI)	9.65

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 334 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG017893 (70 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_2496 Search term: major facilitator family transporter

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000377779 synaptic vesicle glycoprotein 2B [Source:HGNC Symbol;Acc:HGNC:16874] E-value: 2.1e-12 Percent Identity: 22.2
Ensembl 110, assembly GRCh38.p14	ENSP00000332818 synaptic vesicle glycoprotein 2B [Source:HGNC Symbol;Acc:HGNC:16874] E-value: 2.1e-12 Percent Identity: 22.2
Ensembl 110, assembly GRCh38.p14	ENSP00000450992 synaptic vesicle glycoprotein 2B [Source:HGNC Symbol;Acc:HGNC:16874] E-value: 2.1e-12 Percent Identity: 22.2

References