Pseudomonas syringae pv. tomato DC3000, PSPTO_2535

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_2535
NCBI Old Locus Tag	PSPTO2535
Name	Synonym: PSPTO2535
Replicon	chromosome
Genomic location	2797493 - 2800933 (- strand)

Cross-References

RefSeq	NP_792347.1
GI	28869728
Entrez	1184187
INSDC	AAO56042.1
NCBI Locus Tag	PSPTO_2535
NCBI Old Locus Tag	PSPTO2535
UniParc	UPI0000008C04
UniProtKB Acc	Q882T7
UniProtKB ID	Q882T7_PSESM
UniRef100	UniRef100_Q882T7
UniRef50	UniRef50_W0HDN8
UniRef90	UniRef90_Q882T7

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-5.97
Kyte-Doolittle Hydrophobicity Value	-0.228
Molecular Weight (kDa)	127.9
Isoelectric Point (pI)	6.63

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 6 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG017712 (15 members)
Putative Inparalogs	2 predicted inparalogs membrane protein (PSPTO_1904) 94.2% identity membrane protein (PSPTO_1904) 94.2% identity

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_2535

Human Homologs

References