Pseudomonas syringae pv. tomato DC3000, PSPTO_2677

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_2677
NCBI Old Locus Tag	PSPTO2677
Name	Synonym: PSPTO2677
Replicon	chromosome
Genomic location	2972883 - 2973743 (+ strand)

Cross-References

RefSeq	NP_792484.1
GI	28869865
Entrez	1184329
INSDC	AAO56179.1
NCBI Locus Tag	PSPTO_2677
NCBI Old Locus Tag	PSPTO2677
UniParc	UPI0000008C8C
UniProtKB Acc	Q882F1
UniProtKB ID	Q882F1_PSESM
UniRef100	UniRef100_Q882F1
UniRef50	UniRef50_I3XDQ8
UniRef90	UniRef90_Q48IL6

Product

Feature Type	CDS
Coding Frame	1
Product Name	short chain dehydrogenase/reductase family oxidoreductase
Synonyms
Evidence for Translation
Charge (pH 7)	-8.92
Kyte-Doolittle Hydrophobicity Value	-0.217
Molecular Weight (kDa)	30.7
Isoelectric Point (pI)	4.80

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 652 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003332 (498 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_2677 Search term: short chain dehydrogenase/reductase family oxidoreductase

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000296424 3-hydroxybutyrate dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:32389] E-value: 1.2e-26 Percent Identity: 32.9

References