Pseudomonas syringae pv. tomato DC3000, PSPTO_2952

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_2952
NCBI Old Locus Tag	PSPTO2952
Name	Synonym: PSPTO2952
Replicon	chromosome
Genomic location	3317979 - 3320042 (- strand)

Cross-References

RefSeq	NP_792749.1
GI	28870130
Entrez	1184606
INSDC	AAO56444.1
NCBI Locus Tag	PSPTO_2952
NCBI Old Locus Tag	PSPTO2952
UniParc	UPI0000008D8E
UniProtKB Acc	Q881E2
UniProtKB ID	Q881E2_PSESM
UniRef100	UniRef100_Q881E2
UniRef50	UniRef50_A1RBX5
UniRef90	UniRef90_Q48J07

Product

Feature Type	CDS
Coding Frame	1
Product Name	glycosidase
Synonyms
Evidence for Translation
Charge (pH 7)	-27.74
Kyte-Doolittle Hydrophobicity Value	-0.100
Molecular Weight (kDa)	75.9
Isoelectric Point (pI)	4.96

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 14 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG015978 (125 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_2952 Search term: glycosidase

Human Homologs

References