Pseudomonas syringae pv. tomato DC3000, PSPTO_2955

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_2955
NCBI Old Locus Tag	PSPTO2955
Name	Synonym: PSPTO2955
Replicon	chromosome
Genomic location	3322024 - 3322977 (+ strand)

Cross-References

RefSeq	NP_792752.1
GI	28870133
Entrez	1184609
INSDC	AAO56447.1
NCBI Locus Tag	PSPTO_2955
NCBI Old Locus Tag	PSPTO2955
UniParc	UPI0000008D91
UniProtKB Acc	Q881D9
UniProtKB ID	Q881D9_PSESM
UniRef100	UniRef100_Q881D9
UniRef50	UniRef50_Q3JGD8
UniRef90	UniRef90_F3EBQ6

Product

Feature Type	CDS
Coding Frame	1
Product Name	transcriptional activator FtrA
Synonyms
Evidence for Translation
Charge (pH 7)	2.28
Kyte-Doolittle Hydrophobicity Value	-0.089
Molecular Weight (kDa)	35.0
Isoelectric Point (pI)	7.66

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 433 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG018126 (56 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_2955 Search term: transcriptional activator FtrA

Human Homologs

References