Pseudomonas syringae pv. tomato DC3000, PSPTO_3067

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3067
NCBI Old Locus Tag	PSPTO3067
Name	Synonym: PSPTO3067
Replicon	chromosome
Genomic location	3449676 - 3450368 (+ strand)

Cross-References

RefSeq	NP_792861.1
GI	28870242
Entrez	1184724
INSDC	AAO56556.1
NCBI Locus Tag	PSPTO_3067
NCBI Old Locus Tag	PSPTO3067
UniParc	UPI0000008DFA
UniProtKB Acc	Q880T4
UniProtKB ID	Q880T4_PSESM
UniRef100	UniRef100_Q880T4
UniRef50	UniRef50_Q880T4
UniRef90	UniRef90_Q880T4

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-9.27
Kyte-Doolittle Hydrophobicity Value	-0.436
Molecular Weight (kDa)	25.3
Isoelectric Point (pI)	4.63

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in one genus

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG018179 (96 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3067

Human Homologs

References