Pseudomonas syringae pv. tomato DC3000, PSPTO_3183

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3183
NCBI Old Locus Tag	PSPTO3183
Name	Synonym: PSPTO3183
Replicon	chromosome
Genomic location	3574134 - 3574970 (+ strand)

Cross-References

RefSeq	NP_792972.1
GI	28870353
Entrez	1184840
INSDC	AAO56667.1
NCBI Locus Tag	PSPTO_3183
NCBI Old Locus Tag	PSPTO3183
UniParc	UPI0000008E68
UniProtKB Acc	Q880H5
UniProtKB ID	Q880H5_PSESM
UniRef100	UniRef100_Q880H5
UniRef50	UniRef50_Q880H5
UniRef90	UniRef90_Q880H5

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-4.39
Kyte-Doolittle Hydrophobicity Value	-0.154
Molecular Weight (kDa)	29.7
Isoelectric Point (pI)	6.28

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 385 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG018222 (46 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3183

Human Homologs

References