Pseudomonas syringae pv. tomato DC3000, PSPTO_3220

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3220
NCBI Old Locus Tag	PSPTO3220
Name	Synonym: PSPTO3220
Replicon	chromosome
Genomic location	3621993 - 3623504 (- strand)

Cross-References

RefSeq	NP_793005.1
GI	28870386
Entrez	1184877
INSDC	AAO56700.1
NCBI Locus Tag	PSPTO_3220
NCBI Old Locus Tag	PSPTO3220
UniParc	UPI0000008E84
UniProtKB Acc	Q880E7
UniProtKB ID	Q880E7_PSESM
UniRef100	UniRef100_Q880E7
UniRef50	UniRef50_Q87UJ2
UniRef90	UniRef90_Q880E7

Product

Feature Type	CDS
Coding Frame	1
Product Name	ISPsy5, transposase
Synonyms
Evidence for Translation
Charge (pH 7)	5.91
Kyte-Doolittle Hydrophobicity Value	-0.493
Molecular Weight (kDa)	57.1
Isoelectric Point (pI)	8.21

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 174 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG014674 (58 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3220 Search term: ISPsy5, transposase

Human Homologs

References