Pseudomonas syringae pv. tomato DC3000, PSPTO_3273

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3273
NCBI Old Locus Tag	PSPTO3273
Name	Synonym: PSPTO3273
Replicon	chromosome
Genomic location	3698579 - 3699079 (+ strand)

Cross-References

RefSeq	NP_793056.1
GI	28870437
Entrez	1184931
INSDC	AAO56751.1
NCBI Locus Tag	PSPTO_3273
NCBI Old Locus Tag	PSPTO3273
UniParc	UPI0000008EB4
UniProtKB Acc	Q87ZZ9
UniProtKB ID	Q87ZZ9_PSESM
UniRef100	UniRef100_Q87ZZ9
UniRef50	UniRef50_Q87ZZ9
UniRef90	UniRef90_Q87ZZ9

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-8.38
Kyte-Doolittle Hydrophobicity Value	0.111
Molecular Weight (kDa)	18.3
Isoelectric Point (pI)	4.44

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 41 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000142 (349 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3273

Human Homologs

References