Pseudomonas syringae pv. tomato DC3000, PSPTO_3369 (nuoF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_3369
NCBI Old Locus TagPSPTO3369
Name
nuoF
Synonym: PSPTO3369
Replicon chromosome
Genomic location 3807298 - 3808656 (+ strand)

Cross-References

RefSeq NP_793152.1
GI 28870533
Entrez 1185028
INSDC AAO56847.1
NCBI Locus Tag PSPTO_3369
NCBI Old Locus Tag PSPTO3369
UniParc UPI0000008F12
UniProtKB Acc Q87ZQ5
UniProtKB ID Q87ZQ5_PSESM
UniRef100 UniRef100_Q87ZQ5
UniRef50 UniRef50_P31979
UniRef90 UniRef90_Q4K9T2

Product

Feature Type CDS
Coding Frame 1
Product Name
NADH dehydrogenase I subunit F
Synonyms
Evidence for Translation
Charge (pH 7) -0.34
Kyte-Doolittle Hydrophobicity Value -0.180
Molecular Weight (kDa) 48.8
Isoelectric Point (pI) 6.92

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 458 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002153 (868 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_3369
Search term: nuoF

Human Homologs

Ensembl 110, assembly GRCh38.p14
NADH:ubiquinone oxidoreductase core subunit V1 [Source:HGNC Symbol;Acc:HGNC:7716]
E-value: 1.1e-87
Percent Identity: 42.3
Ensembl 110, assembly GRCh38.p14
NADH:ubiquinone oxidoreductase core subunit V1 [Source:HGNC Symbol;Acc:HGNC:7716]
E-value: 1.1e-87
Percent Identity: 42.3
Ensembl 110, assembly GRCh38.p14
NADH:ubiquinone oxidoreductase core subunit V1 [Source:HGNC Symbol;Acc:HGNC:7716]
E-value: 1.1e-87
Percent Identity: 42.3
Ensembl 110, assembly GRCh38.p14
NADH:ubiquinone oxidoreductase core subunit V1 [Source:HGNC Symbol;Acc:HGNC:7716]
E-value: 1.1e-87
Percent Identity: 42.3

References

No references are associated with this feature.