Pseudomonas syringae pv. tomato DC3000, PSPTO_3458

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3458
NCBI Old Locus Tag	PSPTO3458
Name	Synonym: PSPTO3458
Replicon	chromosome
Genomic location	3900878 - 3901207 (- strand)

Cross-References

RefSeq	NP_793238.1
GI	28870619
Entrez	1185123
INSDC	AAO56933.1
NCBI Locus Tag	PSPTO_3458
NCBI Old Locus Tag	PSPTO3458
UniParc	UPI0000008F66
UniProtKB Acc	Q87ZH1
UniProtKB ID	Q87ZH1_PSESM
UniRef100	UniRef100_Q87ZH1
UniRef50	UniRef50_D7I1I8
UniRef90	UniRef90_A0A099SIT9

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-1.80
Kyte-Doolittle Hydrophobicity Value	-0.194
Molecular Weight (kDa)	12.3
Isoelectric Point (pI)	5.11

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 106 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG018351 (99 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3458

Human Homologs

References