Pseudomonas syringae pv. tomato DC3000, PSPTO_3462

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3462
NCBI Old Locus Tag	PSPTO3462
Name	Synonym: PSPTO3462
Replicon	chromosome
Genomic location	3904401 - 3906587 (- strand)

Cross-References

RefSeq	NP_793242.1
GI	28870623
Entrez	1185127
INSDC	AAO56937.1
NCBI Locus Tag	PSPTO_3462
NCBI Old Locus Tag	PSPTO3462
UniParc	UPI0000008F6A
UniProtKB Acc	Q87ZG7
UniProtKB ID	Q87ZG7_PSESM
UniRef100	UniRef100_Q87ZG7
UniRef50	UniRef50_I4K3W6
UniRef90	UniRef90_Q87ZG7

Product

Feature Type	CDS
Coding Frame	1
Product Name	TonB-dependent siderophore receptor
Synonyms
Evidence for Translation
Charge (pH 7)	-18.10
Kyte-Doolittle Hydrophobicity Value	-0.386
Molecular Weight (kDa)	78.5
Isoelectric Point (pI)	4.77

Subcellular localization

Individual Mappings	Localization Confidence PMID Outer Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 211 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003507 (512 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3462 Search term: TonB-dependent siderophore receptor

Human Homologs

References