Pseudomonas syringae pv. tomato DC3000, PSPTO_3466 (ssuD)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3466
NCBI Old Locus Tag	PSPTO3466
Name	ssuD Synonym: PSPTO3466
Replicon	chromosome
Genomic location	3912138 - 3913277 (+ strand)

Cross-References

RefSeq	NP_793246.1
GI	28870627
Entrez	1185131
INSDC	AAO56941.1
NCBI Locus Tag	PSPTO_3466
NCBI Old Locus Tag	PSPTO3466
UniParc	UPI0000008F6E
UniProtKB Acc	Q87ZG3
UniProtKB ID	SSUD_PSESM
UniRef100	UniRef100_Q87ZG3
UniRef50	UniRef50_P40402
UniRef90	UniRef90_Q48H03

Product

Feature Type	CDS
Coding Frame	1
Product Name	alkanesulfonate monooxygenase
Synonyms
Evidence for Translation
Charge (pH 7)	-4.62
Kyte-Doolittle Hydrophobicity Value	-0.211
Molecular Weight (kDa)	41.6
Isoelectric Point (pI)	6.19

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
7K14	FLAVOPROTEIN, OXIDOREDUCTASE	09/07/20	Ternary soak structure of alkanesulfonate monooxygenase MsuD from Pseudomonas fluorescens with FMN and methanesulfonate	Pseudomonas fluorescens	2.75	X-RAY DIFFRACTION	92.8
7K64	FLAVOPROTEIN	09/18/20	Binary titrated soak structure of alkanesulfonate monooxygenase MsuD from Pseudomonas fluorescens with FMN	Pseudomonas fluorescens	2.8	X-RAY DIFFRACTION	92.8
7JYB	FLAVOPROTEIN, OXIDOREDUCTASE	08/30/20	Binary soak structure of alkanesulfonate monooxygenase MsuD from Pseudomonas fluorescens with FMN	Pseudomonas fluorescens	2.76	X-RAY DIFFRACTION	92.8
7JV3	FLAVOPROTEIN, OXIDOREDUCTASE	08/20/20	Crystal structure of alkanesulfonate monooxygenase MsuD from Pseudomonas fluorescens	Pseudomonas fluorescens	2.8	X-RAY DIFFRACTION	92.8
7JW9	FLAVOPROTEIN, OXIDOREDUCTASE	08/25/20	Ternary cocrystal structure of alkanesulfonate monooxygenase MsuD from Pseudomonas fluorescens	Pseudomonas fluorescens	2.39	X-RAY DIFFRACTION	92.8

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 214 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001724 (1790 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3466 Search term: ssuD Search term: alkanesulfonate monooxygenase

Human Homologs

References