Pseudomonas syringae pv. tomato DC3000, PSPTO_3556 (glcE)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3556
NCBI Old Locus Tag	PSPTO3556
Name	glcE Synonym: PSPTO3556
Replicon	chromosome
Genomic location	4013245 - 4014303 (+ strand)

Cross-References

RefSeq	NP_793336.1
GI	28870717
Entrez	1185221
INSDC	AAO57031.1
NCBI Locus Tag	PSPTO_3556
NCBI Old Locus Tag	PSPTO3556
UniParc	UPI0000008FC7
UniProtKB Acc	Q87Z74
UniProtKB ID	Q87Z74_PSESM
UniRef100	UniRef100_Q87Z74
UniRef50	UniRef50_P52073
UniRef90	UniRef90_Q87Z74

Product

Feature Type	CDS
Coding Frame	1
Product Name	glycolate oxidase FAD binding subunit
Synonyms
Evidence for Translation
Charge (pH 7)	-1.25
Kyte-Doolittle Hydrophobicity Value	-0.172
Molecular Weight (kDa)	37.9
Isoelectric Point (pI)	6.71

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 416 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004920 (479 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3556 Search term: glcE Search term: glycolate oxidase FAD binding subunit

Human Homologs

References