Pseudomonas syringae pv. tomato DC3000, PSPTO_3626

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3626
NCBI Old Locus Tag	PSPTO3626
Name	Synonym: PSPTO3626
Replicon	chromosome
Genomic location	4087984 - 4088391 (- strand)

Cross-References

RefSeq	NP_793403.1
GI	28870784
Entrez	1185291
INSDC	AAO57098.1
NCBI Locus Tag	PSPTO_3626
NCBI Old Locus Tag	PSPTO3626
UniParc	UPI0000009006
UniProtKB Acc	Q87Z11
UniProtKB ID	Q87Z11_PSESM
UniRef100	UniRef100_Q87Z11
UniRef50	UniRef50_A0A0A1HWT8
UniRef90	UniRef90_Q4ZR06

Product

Feature Type	CDS
Coding Frame	1
Product Name	lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7)	3.43
Kyte-Doolittle Hydrophobicity Value	-0.533
Molecular Weight (kDa)	14.3
Isoelectric Point (pI)	9.45

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 2 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG013708 (482 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3626 Search term: lipoprotein

Human Homologs

References