Pseudomonas syringae pv. tomato DC3000, PSPTO_3667

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_3667
NCBI Old Locus TagPSPTO3667
Name
Synonym: PSPTO3667
Replicon chromosome
Genomic location 4135494 - 4136024 (+ strand)

Cross-References

RefSeq NP_793441.1
GI 28870822
Entrez 1185332
INSDC AAO57136.1
NCBI Locus Tag PSPTO_3667
NCBI Old Locus Tag PSPTO3667
UniParc UPI000000902A
UniProtKB Acc Q87YX5
UniProtKB ID Q87YX5_PSESM
UniRef100 UniRef100_Q87YX5
UniRef50 UniRef50_V6J2T0
UniRef90 UniRef90_Q87YX5

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -5.90
Kyte-Doolittle Hydrophobicity Value -0.231
Molecular Weight (kDa) 19.3
Isoelectric Point (pI) 5.76

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 115 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003841 (525 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_3667

Human Homologs

Ensembl 110, assembly GRCh38.p14
ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase [Source:HGNC Symbol;Acc:HGNC:17785]
E-value: 6.3e-18
Percent Identity: 33.5

References

No references are associated with this feature.